Salmonella enterica subsp. enterica serovar Typhimurium strain

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Salmonella

Description

Salmonella enterica subsp. enterica serovar Typhimurium is a significant pathogen known for its role in foodborne illnesses. This Gram-negative bacterium is characterized by its spirilla shape and microaerophilic oxygen requirement, thriving optimally at 37°C within a mesophilic temperature range. It is a chemoorganotroph, deriving energy from organic compounds, and is typically found in chains or singles. S. Typhimurium is associated with a variety of hosts, including Homo sapiens (humans), Gallus gallus (domestic chickens), and other metazoans as well as several plant species such as Solanum lycopersicum (tomatoes) and Hordeum vulgare (barley). This wide host range reflects its ecological adaptability and potential for transmission across different trophic levels. The strain is nonsporulating and possesses six replicons along with two membranes, which is characteristic of its Gram-negative classification. Although it does not exhibit mobility, it does possess flagella, facilitating its movement in viscous environments. The bacterium is known to cause various health effects in humans, including acute gastroenteritis, bacteremia, and systemic infections, underscoring its public health significance. Ecologically, S. Typhimurium's ability to colonize both animal and plant hosts illustrates its versatility and poses challenges for food safety and public health. Its presence in the food chain highlights the importance of proper food handling and hygiene practices to prevent outbreaks of salmonellosis and related illnesses.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusSalmonella
SpeciesSalmonella enterica
Strainsubsp. enterica serovar Typhimurium strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Salmonella enterica subsp. enterica serovar Typhimurium strain
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Singles
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Salmonella enterica subsp. enterica serovar Typhimurium strain

Gene Summary

Adenine Count

12373 bp

Thymine Count

12428 bp

Guanine Count

8391 bp

Cytosine Count

9007 bp

Genome Length

42199 bp

Protein-coding Genes

54 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
orotate phosphoribosyltransferaseDM286_RS20615Not AvailableNegative3933939 - 393458023563.3
ribonuclease phDM286_RS20620Not AvailableNegative3934659 - 393537525270.4
yicc/yloc family endoribonucleaseDM286_RS20625Not AvailablePositive3935501 - 393636433126.9
lysr family transcriptional regulatorDM286_RS20630Not AvailableNegative3936414 - 393731634144.4
harldq motif mbl-fold proteinDM286_RS20635Not AvailablePositive3937390 - 393827132100.5
trimeric intracellular cation channel family proteinDM286_RS20640Not AvailablePositive3938522 - 393913922111.0
nad-dependent dna ligase ligbDM286_RS20645Not AvailableNegative3939136 - 394082162857.4
guanylate kinaseDM286_RS20650Not AvailablePositive3941078 - 394170123500.0
dna-directed rna polymerase subunit omegaDM286_RS20655Not AvailablePositive3941756 - 394203110237.2
bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolaseDM286_RS20660Not AvailablePositive3942050 - 394416179520.4

Displaying genes 9541 – 9550 of 10391 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

48 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm00004573,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dioneC19H24O4Chemical structure of 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dioneNot available
Average316.3915Da
Monoisotopic316.1674593Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001429decanoateC10H19O2Chemical structure of decanoateNot available
Average171.2567Da
Monoisotopic171.138504852Da
BASm0001691hydrogenselenideHSeChemical structure of hydrogenselenideNot available
Average79.98Da
Monoisotopic80.924896Da
BASm0001774tetradecanoateC14H27O2Chemical structure of tetradecanoateNot available
Average227.363Da
Monoisotopic227.2011051Da
BASm0001775(9Z)-octadecenoateC18H33O2Chemical structure of (9Z)-octadecenoateNot available
Average281.4534Da
Monoisotopic281.2480553Da
BASm0001842(5Z,8Z,11Z,14Z)-eicosatetraenoateC20H31O2Chemical structure of (5Z,8Z,11Z,14Z)-eicosatetraenoateNot available
Average303.467Da
Monoisotopic303.2329538Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–10 of 48 metabolites

Health Effects

Health ConditionRelationReference
GastroenteritisCausesPMC12502522
DiarrheaCausesPMC12502522
GastroenteritisCausesPMC5109407
Food poisoningCausesPMC5109407
SalmonellosisCausesPMC6516042
Acute gastroenteritisCausesPMC6516042
Intestinal inflammationCausesPMC6516042
Gallbladder empyemaCausesPMC10442058
Disseminated diseaseCausesPMC10442058
GastroenteritisCausesPMC10442058

Displaying health effects 1 – 10 of 22 in total