Pantoea vagans strain ND02

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea vagans strain ND02 is a Gram-negative, rod-shaped bacterium associated with host environments. It is classified as facultatively anaerobic, indicating that it can thrive in both the presence and absence of oxygen. This strain does not exhibit mobility, suggesting it remains relatively stationary within its habitat. Notably, Pantoea vagans ND02 possesses flagella, which may play a role in its interactions with surrounding microorganisms or host organisms, despite its lack of motility. The bacterium is mesophilic, indicating its optimal growth temperature falls within moderate ranges typically associated with many living organisms. It features a single replicon and is characterized by the presence of two membranes, a trait common among Gram-negative bacteria. Pantoea vagans ND02 does not undergo sporulation, which is consistent with its free-living lifestyle, allowing it to maintain viability in various environmental conditions without forming spores. The ecological significance of Pantoea vagans strain ND02 lies in its ability to occupy host-associated niches where it may interact with other microorganisms and possibly contribute to nutrient cycling or disease suppression. Its non-motile nature suggests that it may rely on passive movement through host-associated fluids or substrates to establish and maintain its ecological role. This strain, therefore, exemplifies the diversity of bacterial life forms that adapt to specific ecological niches, highlighting the importance of host-associated bacteria in broader biological systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea vagans
Strainstrain ND02

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Pantoea vagans strain ND02
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea vagans strain ND02 chromosome, complete genome.

Gene Summary

Adenine Count

993446 bp

Thymine Count

996027 bp

Guanine Count

1159798 bp

Cytosine Count

1163993 bp

Genome Length

4313264 bp

Protein-coding Genes

3757 genes

Non-Coding Genes

276 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thiamine abc transporter atp-binding protein thiqLK04_RS15510Not AvailablePositive3321878 - 332257925451.1
deda family proteinLK04_RS15515Not AvailableNegative3322576 - 332334028343.7
dna polymerase iiLK04_RS15520Not AvailablePositive3323494 - 332585489557.8
rna polymerase-associated protein rapaLK04_RS15525Not AvailablePositive3326007 - 3328913109715.0
bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rluaLK04_RS15530Not AvailablePositive3328934 - 332959325042.2
co-chaperone djlaLK04_RS15535Not AvailableNegative3329738 - 333055030258.7
lps assembly protein lptdLK04_RS15540Not AvailablePositive3330732 - 333311090040.3
peptidylprolyl isomerase suraLK04_RS15545Not AvailablePositive3333165 - 333446047524.7
4-hydroxythreonine-4-phosphate dehydrogenase pdxaLK04_RS15550Not AvailablePositive3334450 - 333544235261.5
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaLK04_RS15555Not AvailablePositive3335435 - 333625930527.8

Displaying genes 3151 – 3160 of 4033 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.