Pantoea vagans strain ND02

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea vagans strain ND02 is a Gram-negative, rod-shaped bacterium associated with host environments. It is classified as facultatively anaerobic, indicating that it can thrive in both the presence and absence of oxygen. This strain does not exhibit mobility, suggesting it remains relatively stationary within its habitat. Notably, Pantoea vagans ND02 possesses flagella, which may play a role in its interactions with surrounding microorganisms or host organisms, despite its lack of motility. The bacterium is mesophilic, indicating its optimal growth temperature falls within moderate ranges typically associated with many living organisms. It features a single replicon and is characterized by the presence of two membranes, a trait common among Gram-negative bacteria. Pantoea vagans ND02 does not undergo sporulation, which is consistent with its free-living lifestyle, allowing it to maintain viability in various environmental conditions without forming spores. The ecological significance of Pantoea vagans strain ND02 lies in its ability to occupy host-associated niches where it may interact with other microorganisms and possibly contribute to nutrient cycling or disease suppression. Its non-motile nature suggests that it may rely on passive movement through host-associated fluids or substrates to establish and maintain its ecological role. This strain, therefore, exemplifies the diversity of bacterial life forms that adapt to specific ecological niches, highlighting the importance of host-associated bacteria in broader biological systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea vagans
Strainstrain ND02

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Pantoea vagans strain ND02
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea vagans strain ND02 chromosome, complete genome.

Gene Summary

Adenine Count

993446 bp

Thymine Count

996027 bp

Guanine Count

1159798 bp

Cytosine Count

1163993 bp

Genome Length

4313264 bp

Protein-coding Genes

3757 genes

Non-Coding Genes

276 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
efflux rnd transporter permease subunitLK04_RS09155Not AvailableNegative1975389 - 1978550113330.0
efflux rnd transporter periplasmic adaptor subunitLK04_RS09160Not AvailableNegative1978552 - 197970040768.3
type vi secretion system vgr family proteinLK04_RS20315Not AvailablePositive1980436 - 198276386934.8
duf2169 family type vi secretion system accessory proteinLK04_RS09170Not AvailablePositive1982763 - 198505786550.8
pentapeptide repeat-containing proteinLK04_RS09175Not AvailablePositive1985061 - 198614641053.0
duf3540 domain-containing proteinLK04_RS09180Not AvailablePositive1986133 - 198674122567.0
duf4150 domain-containing proteinLK04_RS09185Not AvailablePositive1986755 - 198713512732.4
hypothetical proteinLK04_RS09190Not AvailablePositive1987212 - 198771518000.5
type vi secretion system lipoprotein tssjLK04_RS09195Not AvailablePositive1987700 - 198820318355.8
type vi secretion system baseplate subunit tsskLK04_RS09200Not AvailablePositive1988223 - 198956650218.5

Displaying genes 1931 – 1940 of 4033 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.