Pantoea vagans strain ND02

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea vagans strain ND02 is a Gram-negative, rod-shaped bacterium associated with host environments. It is classified as facultatively anaerobic, indicating that it can thrive in both the presence and absence of oxygen. This strain does not exhibit mobility, suggesting it remains relatively stationary within its habitat. Notably, Pantoea vagans ND02 possesses flagella, which may play a role in its interactions with surrounding microorganisms or host organisms, despite its lack of motility. The bacterium is mesophilic, indicating its optimal growth temperature falls within moderate ranges typically associated with many living organisms. It features a single replicon and is characterized by the presence of two membranes, a trait common among Gram-negative bacteria. Pantoea vagans ND02 does not undergo sporulation, which is consistent with its free-living lifestyle, allowing it to maintain viability in various environmental conditions without forming spores. The ecological significance of Pantoea vagans strain ND02 lies in its ability to occupy host-associated niches where it may interact with other microorganisms and possibly contribute to nutrient cycling or disease suppression. Its non-motile nature suggests that it may rely on passive movement through host-associated fluids or substrates to establish and maintain its ecological role. This strain, therefore, exemplifies the diversity of bacterial life forms that adapt to specific ecological niches, highlighting the importance of host-associated bacteria in broader biological systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea vagans
Strainstrain ND02

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Pantoea vagans strain ND02
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea vagans strain ND02 chromosome, complete genome.

Gene Summary

Adenine Count

993446 bp

Thymine Count

996027 bp

Guanine Count

1159798 bp

Cytosine Count

1163993 bp

Genome Length

4313264 bp

Protein-coding Genes

3757 genes

Non-Coding Genes

276 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinylglutamate desuccinylase/aspartoacylase family proteinLK04_RS06170Not AvailableNegative1336929 - 133804441115.3
abc transporter substrate-binding proteinLK04_RS06175Not AvailableNegative1338220 - 133901728865.7
ybak/prolyl-trna synthetase associated domain-containing proteinLK04_RS06180Not AvailableNegative1339084 - 133956017071.7
helix-turn-helix domain-containing proteinLK04_RS06185Not AvailableNegative1339547 - 133988212786.8
type ii toxin-antitoxin system hipa family toxinLK04_RS06190Not AvailableNegative1339879 - 134119549477.8
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisieLK04_RS06195Not AvailableNegative1341314 - 134192522362.6
imidazole glycerol phosphate synthase subunit hisfLK04_RS06200Not AvailableNegative1341919 - 134269528405.1
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseLK04_RS06205Not AvailableNegative1342677 - 134341426100.1
imidazole glycerol phosphate synthase subunit hishLK04_RS06210Not AvailableNegative1343414 - 134400421351.7
bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisbLK04_RS06215Not AvailableNegative1344004 - 134507139707.5

Displaying genes 1371 – 1380 of 4033 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.