Herbaspirillum hiltneri N3

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Herbaspirillum

Description

Herbaspirillum hiltneri N3 is a Gram-negative, aerobic bacterium characterized by its rod shape and the presence of flagella, which facilitate motility. This species thrives optimally at a temperature of 29 °C, placing it within the mesophilic temperature range. Notably, H. hiltneri N3 is non-spore-forming and possesses a single replicon, indicating a streamlined genetic structure. The Gram-negative nature of H. hiltneri N3 suggests a specific cell wall composition that may influence its interaction with the environment and its ability to colonize plant roots. The aerobic requirement indicates that this bacterium relies on oxygen for its metabolic processes, which could be significant in its ecological niche, particularly in oxygen-rich environments. The presence of flagella not only aids in mobility but may also enhance the bacterium's ability to establish symbiotic relationships with plants, a characteristic common among members of the Herbaspirillum genus. This ability to associate with plant roots could be crucial for nutrient acquisition and potentially beneficial for plant growth. Overall, the traits of Herbaspirillum hiltneri N3 suggest it plays a significant role in the rhizosphere, where its aerobic metabolism and motility may contribute to soil health and nutrient cycling, thereby supporting plant development in its native habitat. The accession NZ_CP011409.1 provides a genetic reference for further studies on this bacterium's ecological functions and interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusHerbaspirillum
SpeciesHerbaspirillum hiltneri
StrainN3

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Herbaspirillum hiltneri N3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Herbaspirillum hiltneri N3 chromosome, complete genome.

Gene Summary

Adenine Count

972883 bp

Thymine Count

975758 bp

Guanine Count

1511436 bp

Cytosine Count

1505397 bp

Genome Length

4965474 bp

Protein-coding Genes

4527 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadp-dependent malic enzymeF506_RS18190Not AvailableNegative4007002 - 400931484071.2
thiamine-phosphate kinaseF506_RS18195Not AvailablePositive4009567 - 401053233931.6
phosphatidylglycerophosphatase aF506_RS18200Not AvailablePositive4010529 - 401106520182.8
cina family proteinF506_RS18205Not AvailablePositive4011204 - 401168316328.3
orotidine-5'-phosphate decarboxylaseF506_RS18210Not AvailableNegative4011780 - 401259829324.9
lema family proteinF506_RS18215Not AvailablePositive4012737 - 401333021981.0
ygcg family proteinF506_RS18220Not AvailablePositive4013349 - 401419429446.0
tpm domain-containing proteinF506_RS18225Not AvailablePositive4014194 - 401469418828.6
diguanylate cyclase domain-containing proteinF506_RS18230Not AvailablePositive4014768 - 401580837715.7
d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidaseF506_RS18235Not AvailableNegative4015856 - 401728951035.9

Displaying genes 3711 – 3720 of 4594 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.