Thioalkalivibrio versutus strain D301

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Ectothiorhodospiraceae

Genus

Thioalkalivibrio

Description

Thioalkalivibrio versutus strain D301 is a Gram-negative, rod-shaped bacterium notable for its unique metabolic capabilities. This strain possesses flagella, which facilitate motility, allowing it to navigate its environment effectively. Its genetic makeup is characterized by a single replicon, indicating a streamlined genome organization. The strain is part of the Thioalkalivibrio genus, which is known for its ability to thrive in alkaline and saline environments. The presence of flagella suggests that motility may play a significant role in its ecological interactions and survival strategies within such challenging habitats. The accession number NZ_CP011367.1 provides a reference for accessing more detailed genomic information about this strain, which could further elucidate its functional characteristics and metabolic pathways. The ecological insight gained from studying Thioalkalivibrio versutus strain D301 highlights its potential role in biogeochemical cycles, particularly in sulfur and carbon cycling in alkaline environments. Its adaptability to high pH and salinity conditions may make it a key player in bioremediation efforts or in the maintenance of ecosystem balance in extreme habitats. Understanding the traits of this strain contributes to a broader knowledge of microbial diversity and the functional roles of microorganisms in extreme environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyEctothiorhodospiraceae
GenusThioalkalivibrio
SpeciesThioalkalivibrio versutus
Strainstrain D301

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Thioalkalivibrio versutus strain D301
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thioalkalivibrio versutus strain D301 chromosome, complete genome.

Gene Summary

Adenine Count

500631 bp

Thymine Count

508024 bp

Guanine Count

981103 bp

Cytosine Count

979603 bp

Genome Length

2969361 bp

Protein-coding Genes

2764 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
holliday junction branch migration protein ruvaTVD_RS10000B8GUJ5Negative2164521 - 216512921084.6
crossover junction endodeoxyribonuclease ruvcTVD_RS10005C4LBN2Negative2165126 - 216564117876.6
yebc/pmpr family dna-binding transcriptional regulatorTVD_RS10010B8GUJ7Negative2165663 - 216640326733.1
triacylglycerol lipaseTVD_RS10015Not AvailableNegative2166805 - 216743422734.9
aspartate--trna ligaseTVD_RS10020Q0A582Negative2167456 - 216924066777.1
duf502 domain-containing proteinTVD_RS10025F4IQJ6Negative2169342 - 216999223354.3
fmdb family zinc ribbon proteinTVD_RS10030Not AvailableNegative2169996 - 217031310668.2
dsre family proteinTVD_RS10035Not AvailablePositive2170809 - 217118613261.8
sdr family nad(p)-dependent oxidoreductaseTVD_RS10040P0AFP5Positive2171197 - 217205131286.6
nucleoside recognition domain-containing proteinTVD_RS10045P35158Positive2172071 - 217344447495.8

Displaying genes 2041 – 2050 of 2812 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

166 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da

Displaying 1–10 of 166 metabolites

Health Effects

No health effects information available for this bacterium.