Planctomyces sp. SH-PL14

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Planctomycetia

Order

Planctomycetales

Family

Planctomycetaceae

Genus

Planctomyces

Description

Planctomyces sp. SH-PL14 is a member of the Planctomycetes phylum, notable for its unique cellular structure and ecological roles. This strain possesses a single replicon, indicating a streamlined genomic organization which is characteristic of many bacteria within this group. Its genetic material is accessible under the accession number NZ_CP011270.1, which allows for further exploration of its genomic features. Planctomyces species are often recognized for their distinctive morphology, including the presence of a stalk or holdfast structure, contributing to their ecological niche in aquatic environments. They are known to inhabit various environments, including freshwater and marine ecosystems, where they play a role in nutrient cycling and organic matter degradation. The streamlined nature of Planctomyces sp. SH-PL14's genome, along with its unique cellular architecture, suggests adaptations to specific ecological roles, likely involving interactions with other microbial communities and contributions to biogeochemical processes. Their presence in diverse environments indicates their potential significance in maintaining ecosystem health and stability. Understanding the traits of Planctomyces sp. SH-PL14 can provide insights into the broader ecological functions of Planctomycetes and their roles in microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPlanctomycetota
ClassPlanctomycetia
OrderPlanctomycetales
FamilyPlanctomycetaceae
GenusPlanctomyces
SpeciesPlanctomyces sp. SH-PL14
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Planctomyces sp. SH-PL14 chromosome, complete genome.

Gene Summary

Adenine Count

1447563 bp

Thymine Count

1460186 bp

Guanine Count

2778551 bp

Cytosine Count

2756473 bp

Genome Length

8442773 bp

Protein-coding Genes

6355 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
site-specific integraseVT03_RS27825Not AvailablePositive7199303 - 719999526607.8
acyl carrier proteinVT03_RS27830Not AvailablePositive7200099 - 720048213746.4
ycf48-related proteinVT03_RS27835Not AvailablePositive7200828 - 7204142119921.0
rna polymerase sigma factorVT03_RS27840Not AvailableNegative7204180 - 720483024463.2
duf1501 domain-containing proteinVT03_RS27845Not AvailablePositive7204976 - 720639751297.4
npcbm/new2 domain-containing proteinVT03_RS27850Not AvailablePositive7206465 - 720767342735.2
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseVT03_RS27855Not AvailablePositive7208380 - 720989754004.5
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseVT03_RS27860Not AvailablePositive7210120 - 721153549944.2
phospho-n-acetylmuramoyl-pentapeptide- transferaseVT03_RS27865Not AvailablePositive7211685 - 721277037926.3
dna topoisomerase (atp-hydrolyzing) subunit aVT03_RS27870Not AvailableNegative7212828 - 721518287450.4

Displaying genes 5491 – 5500 of 6428 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.