Pandoraea oxalativorans strain DSM 23570

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Pandoraea

Description

Pandoraea oxalativorans strain DSM 23570 is a Gram-negative, rod-shaped bacterium. This organism is notable for its unique genomic structure, containing three replicons, which can have implications for its genetic diversity and adaptability. The strain has been assigned several accessions in public databases, specifically NZ_CP011253.3, NZ_CP011519.2, and NZ_CP011520.2. These accessions provide a resource for researchers interested in studying the genomic features and characteristics of this bacterium. Biologically, Pandoraea species are often associated with specific ecological niches, particularly in environments where they may play roles in biogeochemical cycles. The ability of Pandoraea oxalativorans to potentially degrade oxalic acid suggests its involvement in nutrient cycling, particularly in soils or environments rich in organic acids. This trait may highlight its ecological significance in the decomposition processes and interactions within microbial communities. In conclusion, the characteristics of Pandoraea oxalativorans strain DSM 23570, including its Gram-negative status, rod shape, and unique genomic composition with three replicons, together suggest its adaptability and potential functional roles in various ecological contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusPandoraea
SpeciesPandoraea oxalativorans
Strainstrain DSM 23570

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pandoraea oxalativorans strain DSM 23570 chromosome, complete

Gene Summary

Adenine Count

1034677 bp

Thymine Count

1041575 bp

Guanine Count

1770815 bp

Cytosine Count

1783244 bp

Genome Length

5630311 bp

Protein-coding Genes

4921 genes

Non-Coding Genes

80 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinMB84_RS07425Not AvailableNegative1641591 - 16418458729.38
eama family transporter rardMB84_RS07430Not AvailableNegative1641941 - 164284633338.0
histidinol-phosphataseMB84_RS07435Not AvailablePositive1643049 - 164384628234.3
mate family efflux transporterMB84_RS07440Not AvailableNegative1643913 - 164524447244.0
hypothetical proteinMB84_RS30500Not AvailableNegative1645241 - 16454929077.54
yxwgxw repeat-containing proteinMB84_RS07445Not AvailablePositive1645503 - 164585913511.0
aspartate-alanine antiporterMB84_RS07450Not AvailablePositive1646493 - 164818158815.8
aspartate-alanine antiporterMB84_RS07455Not AvailablePositive1648242 - 164992758661.3
bifunctional aspartate transaminase/aspartate 4-decarboxylaseMB84_RS07460Not AvailablePositive1650047 - 165165759994.3
shlb/fhac/hecb family hemolysin secretion/activation proteinMB84_RS07465Not AvailablePositive1652156 - 165338842948.0

Displaying genes 1491 – 1500 of 5233 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.