Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter gummosus |
| Strain | strain 3.2.11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | amphibian skin |
| Biotic relationship | Not Available |
| Host(s) | Plethodon cinereus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015846 bp
Thymine Count
1011071 bp
Guanine Count
2010809 bp
Cytosine Count
2018892 bp
Genome Length
6056618 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit ii | LG3211_RS02125 | Not Available | Positive | 537307 - 538239 | 33332.3 |
| cytochrome c oxidase subunit i | LG3211_RS02130 | Not Available | Positive | 538267 - 539895 | 60956.5 |
| hypothetical protein | LG3211_RS26225 | Not Available | Positive | 539960 - 540100 | 4972.13 |
| cytochrome c oxidase assembly protein | LG3211_RS02135 | Not Available | Positive | 540187 - 540747 | 20380.5 |
| cytochrome c oxidase subunit 3 | LG3211_RS02140 | Not Available | Positive | 540783 - 541661 | 32672.7 |
| twin transmembrane helix small protein | LG3211_RS02145 | Not Available | Negative | 542090 - 542317 | 8302.66 |
| surf1 family protein | LG3211_RS02150 | Not Available | Positive | 542405 - 543145 | 26671.5 |
| hypothetical protein | LG3211_RS02155 | Not Available | Positive | 543277 - 543801 | 19293.8 |
| heme a synthase | LG3211_RS02160 | Not Available | Positive | 543881 - 545029 | 40791.9 |
| heme o synthase | LG3211_RS02165 | Not Available | Positive | 545029 - 545961 | 34282.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
