Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter gummosus |
| Strain | strain 3.2.11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | amphibian skin |
| Biotic relationship | Not Available |
| Host(s) | Plethodon cinereus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015846 bp
Thymine Count
1011071 bp
Guanine Count
2010809 bp
Cytosine Count
2018892 bp
Genome Length
6056618 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar type iii secretion system pore protein flip | LG3211_RS20900 | Not Available | Positive | 5141476 - 5142246 | 27897.5 |
| sigma-70 family rna polymerase sigma factor | LG3211_RS20905 | Not Available | Positive | 5142243 - 5143001 | 27991.6 |
| m48 family metallopeptidase | LG3211_RS20910 | Not Available | Positive | 5142998 - 5143630 | 22364.2 |
| lytic transglycosylase domain-containing protein | LG3211_RS25050 | Not Available | Positive | 5143641 - 5144372 | 25484.3 |
| hypothetical protein | LG3211_RS20920 | Not Available | Negative | 5144437 - 5144781 | 12186.4 |
| hypothetical protein | LG3211_RS20925 | Not Available | Positive | 5145031 - 5145639 | 23017.0 |
| plp-dependent aminotransferase family protein | LG3211_RS20930 | Not Available | Positive | 5145652 - 5147148 | 53172.7 |
| diguanylate cyclase | LG3211_RS20935 | Not Available | Negative | 5147240 - 5148916 | 62020.8 |
| d-amino acid dehydrogenase | LG3211_RS20940 | Not Available | Negative | 5149079 - 5150335 | 45947.5 |
| hypothetical protein | LG3211_RS20945 | Not Available | Negative | 5150460 - 5150708 | 9518.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
