Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter gummosus |
| Strain | strain 3.2.11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | amphibian skin |
| Biotic relationship | Not Available |
| Host(s) | Plethodon cinereus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015846 bp
Thymine Count
1011071 bp
Guanine Count
2010809 bp
Cytosine Count
2018892 bp
Genome Length
6056618 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | LG3211_RS01690 | Not Available | Negative | 429192 - 431468 | 82976.0 |
| lysr family transcriptional regulator | LG3211_RS01695 | Not Available | Negative | 431790 - 432671 | 32303.3 |
| phytanoyl-coa dioxygenase family protein | LG3211_RS01700 | Not Available | Positive | 432857 - 433672 | 29772.0 |
| sodium:solute symporter | LG3211_RS01705 | Not Available | Negative | 433786 - 436224 | 87281.2 |
| coa ester lyase | LG3211_RS01710 | Not Available | Negative | 436314 - 437168 | 29655.8 |
| alpha/beta fold hydrolase | LG3211_RS01715 | Not Available | Positive | 437741 - 438643 | 33450.1 |
| olefin beta-lactone synthetase | LG3211_RS01720 | Not Available | Positive | 438651 - 440315 | 59786.2 |
| 2-alkyl-3-oxoalkanoate reductase | LG3211_RS01725 | Not Available | Positive | 440568 - 441578 | 35636.5 |
| duf1328 domain-containing protein | LG3211_RS24630 | Not Available | Positive | 441658 - 441819 | 5651.27 |
| scp2 domain-containing protein | LG3211_RS01730 | Not Available | Positive | 441882 - 442544 | 23601.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
