Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter gummosus |
| Strain | strain 3.2.11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | amphibian skin |
| Biotic relationship | Not Available |
| Host(s) | Plethodon cinereus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015846 bp
Thymine Count
1011071 bp
Guanine Count
2010809 bp
Cytosine Count
2018892 bp
Genome Length
6056618 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline quinone biosynthesis peptide chaperone pqqd | LG3211_RS16915 | Not Available | Positive | 4195458 - 4195754 | 10690.8 |
| pyrroloquinoline quinone biosynthesis protein pqqe | LG3211_RS16920 | Not Available | Positive | 4195789 - 4196961 | 43247.6 |
| amidase | LG3211_RS16925 | Not Available | Positive | 4197282 - 4198922 | 56772.8 |
| alpha/beta hydrolase | LG3211_RS16930 | Not Available | Negative | 4198955 - 4199971 | 36510.4 |
| helix-turn-helix transcriptional regulator | LG3211_RS16935 | Not Available | Positive | 4200046 - 4200735 | 24502.4 |
| class ii 3-deoxy-7-phosphoheptulonate synthase | LG3211_RS16940 | Not Available | Negative | 4200844 - 4202238 | 52099.0 |
| disulfide bond formation protein b | LG3211_RS16945 | Not Available | Negative | 4202326 - 4202826 | 17857.4 |
| 50s ribosomal protein l17 | LG3211_RS16950 | Not Available | Negative | 4203142 - 4203516 | 13821.0 |
| dna-directed rna polymerase subunit alpha | LG3211_RS16955 | Not Available | Negative | 4203755 - 4204753 | 36368.8 |
| 30s ribosomal protein s4 | LG3211_RS16960 | Not Available | Negative | 4204913 - 4205542 | 23299.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
