Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter gummosus |
| Strain | strain 3.2.11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | amphibian skin |
| Biotic relationship | Not Available |
| Host(s) | Plethodon cinereus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015846 bp
Thymine Count
1011071 bp
Guanine Count
2010809 bp
Cytosine Count
2018892 bp
Genome Length
6056618 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactonate dehydratase | LG3211_RS01295 | Not Available | Positive | 329808 - 330956 | 42402.0 |
| smp-30/gluconolactonase/lre family protein | LG3211_RS01300 | Not Available | Positive | 330956 - 331879 | 33500.4 |
| 2-dehydro-3-deoxygalactonokinase | LG3211_RS01305 | Not Available | Positive | 331876 - 332760 | 32043.6 |
| sodium/sugar symporter | LG3211_RS01310 | Not Available | Positive | 332856 - 334418 | 56151.3 |
| glycoside hydrolase family 27 protein | LG3211_RS24620 | Not Available | Positive | 334448 - 335647 | 43884.9 |
| aldose 1-epimerase | LG3211_RS01315 | Not Available | Positive | 335664 - 336560 | 33106.1 |
| alpha-galactosidase | LG3211_RS01320 | Not Available | Negative | 336606 - 338822 | 81671.6 |
| fadr/gntr family transcriptional regulator | LG3211_RS01325 | Not Available | Positive | 339087 - 339872 | 28728.6 |
| hypothetical protein | LG3211_RS01330 | Not Available | Negative | 340046 - 341545 | 54428.3 |
| pectate lyase | LG3211_RS01335 | Not Available | Negative | 341726 - 342520 | 28103.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
