Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter gummosus |
| Strain | strain 3.2.11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | amphibian skin |
| Biotic relationship | Not Available |
| Host(s) | Plethodon cinereus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015846 bp
Thymine Count
1011071 bp
Guanine Count
2010809 bp
Cytosine Count
2018892 bp
Genome Length
6056618 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein/permease | LG3211_RS16030 | Not Available | Positive | 3911560 - 3913377 | 67170.5 |
| hypothetical protein | LG3211_RS16035 | Not Available | Positive | 3913374 - 3914510 | 43215.1 |
| hypothetical protein | LG3211_RS26490 | Not Available | Negative | 3914654 - 3914821 | 5887.85 |
| Trna-val | Not Available | Not Available | Positive | 3915296 - 3915370 | Not Available |
| excinuclease abc subunit uvrb | LG3211_RS16045 | Not Available | Negative | 3915477 - 3917507 | 76553.3 |
| type iv pilin protein | LG3211_RS16050 | Not Available | Negative | 3917666 - 3918118 | 16338.6 |
| pilus assembly protein | LG3211_RS16055 | Not Available | Negative | 3918131 - 3921943 | 134499.0 |
| pilx n-terminal domain-containing pilus assembly protein | LG3211_RS16060 | Not Available | Negative | 3921954 - 3922472 | 18550.3 |
| pilw family protein | LG3211_RS16065 | Not Available | Negative | 3922481 - 3923683 | 43240.1 |
| type iv pilus modification protein pilv | LG3211_RS16070 | Not Available | Negative | 3923722 - 3924213 | 17756.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
