Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter gummosus |
| Strain | strain 3.2.11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | amphibian skin |
| Biotic relationship | Not Available |
| Host(s) | Plethodon cinereus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015846 bp
Thymine Count
1011071 bp
Guanine Count
2010809 bp
Cytosine Count
2018892 bp
Genome Length
6056618 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LG3211_RS01160 | Not Available | Negative | 277573 - 278031 | 16359.8 |
| alpha-l-fucosidase | LG3211_RS01165 | Not Available | Negative | 278273 - 279727 | 53420.1 |
| alpha-l-fucosidase | LG3211_RS01170 | Not Available | Positive | 280002 - 281480 | 54913.1 |
| terc family protein | LG3211_RS01175 | Not Available | Positive | 281853 - 282821 | 35316.5 |
| dna alkylation repair protein | LG3211_RS01180 | Not Available | Positive | 282945 - 283811 | 31562.0 |
| isoaspartyl peptidase/l-asparaginase family protein | LG3211_RS01185 | Not Available | Negative | 284032 - 285090 | 36640.5 |
| cyanophycinase | LG3211_RS01190 | Not Available | Negative | 285134 - 286195 | 37831.2 |
| rna polymerase sigma factor | LG3211_RS01195 | Not Available | Positive | 286324 - 287025 | 26678.7 |
| fecr domain-containing protein | LG3211_RS01200 | Not Available | Positive | 287003 - 288109 | 39222.2 |
| tonb-dependent receptor | LG3211_RS01205 | Not Available | Positive | 288296 - 291358 | 112471.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
