Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter gummosus |
| Strain | strain 3.2.11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | amphibian skin |
| Biotic relationship | Not Available |
| Host(s) | Plethodon cinereus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015846 bp
Thymine Count
1011071 bp
Guanine Count
2010809 bp
Cytosine Count
2018892 bp
Genome Length
6056618 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sco family protein | LG3211_RS00920 | Not Available | Negative | 222746 - 223369 | 22911.7 |
| hypothetical protein | LG3211_RS00925 | Not Available | Negative | 223469 - 224149 | 24512.2 |
| hypothetical protein | LG3211_RS00930 | Not Available | Negative | 224308 - 224631 | 11102.7 |
| type iii secretion system export apparatus subunit sctu | LG3211_RS00935 | Not Available | Positive | 224913 - 226013 | 40934.2 |
| type iii secretion system export apparatus subunit sctt | LG3211_RS00945 | Not Available | Negative | 226223 - 227008 | 28449.0 |
| type iii secretion system export apparatus subunit scts | LG3211_RS00950 | Not Available | Negative | 227055 - 227312 | 9278.69 |
| hypothetical protein | LG3211_RS27265 | Not Available | Negative | 227452 - 228198 | 24533.1 |
| methyltransferase | LG3211_RS00960 | Not Available | Negative | 228178 - 228399 | 7917.17 |
| type iii secretion system cytoplasmic ring protein sctq | LG3211_RS00965 | Not Available | Negative | 228403 - 229497 | 39661.7 |
| response regulator transcription factor | LG3211_RS27240 | Not Available | Negative | 229508 - 230110 | 21676.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
