Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter gummosus |
| Strain | strain 3.2.11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | amphibian skin |
| Biotic relationship | Not Available |
| Host(s) | Plethodon cinereus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015846 bp
Thymine Count
1011071 bp
Guanine Count
2010809 bp
Cytosine Count
2018892 bp
Genome Length
6056618 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virb4 family type iv secretion/conjugal transfer atpase | LG3211_RS12700 | Not Available | Negative | 3155685 - 3158141 | 91288.4 |
| type iv secretion system protein virb3 | LG3211_RS12705 | Not Available | Negative | 3158272 - 3158580 | 12216.5 |
| trbc/virb2 family protein | LG3211_RS12710 | Not Available | Negative | 3158573 - 3158944 | 13131.2 |
| lytic transglycosylase domain-containing protein | LG3211_RS24885 | Not Available | Negative | 3159079 - 3159921 | 29441.3 |
| p-type dna transfer atpase virb11 | LG3211_RS12720 | Not Available | Negative | 3160064 - 3161104 | 38513.8 |
| trbi/virb10 family protein | LG3211_RS12725 | Not Available | Negative | 3161106 - 3162344 | 43036.9 |
| trbg/virb9 family p-type conjugative transfer protein | LG3211_RS12730 | Not Available | Negative | 3162341 - 3163114 | 29360.8 |
| virb8 family protein | LG3211_RS12735 | Not Available | Negative | 3163111 - 3164163 | 36645.4 |
| hypothetical protein | LG3211_RS12740 | Not Available | Negative | 3164259 - 3164741 | 17091.2 |
| pyridoxal phosphate-dependent aminotransferase | LG3211_RS12745 | Not Available | Negative | 3165114 - 3166262 | 42452.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
