Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter gummosus |
| Strain | strain 3.2.11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | amphibian skin |
| Biotic relationship | Not Available |
| Host(s) | Plethodon cinereus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015846 bp
Thymine Count
1011071 bp
Guanine Count
2010809 bp
Cytosine Count
2018892 bp
Genome Length
6056618 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssk | LG3211_RS11370 | Not Available | Positive | 2800196 - 2801605 | 52298.4 |
| dotu family type iv/vi secretion system protein | LG3211_RS11375 | Not Available | Positive | 2801613 - 2802956 | 49159.6 |
| type vi secretion protein icmf/tssm n-terminal domain-containing protein | LG3211_RS11380 | Not Available | Positive | 2802953 - 2806582 | 133098.0 |
| type vi secretion system protein tssa | LG3211_RS11385 | Not Available | Positive | 2806618 - 2807688 | 37855.6 |
| type vi secretion system contractile sheath small subunit | LG3211_RS11390 | Not Available | Positive | 2807896 - 2808405 | 18853.6 |
| type vi secretion system contractile sheath large subunit | LG3211_RS11395 | Not Available | Positive | 2808463 - 2809947 | 54708.8 |
| type vi secretion system tube protein hcp | LG3211_RS11400 | Not Available | Positive | 2809988 - 2810482 | 17560.7 |
| hypothetical protein | LG3211_RS11405 | Not Available | Positive | 2810576 - 2811073 | 17375.8 |
| hypothetical protein | LG3211_RS11410 | Not Available | Positive | 2811310 - 2811759 | 16849.3 |
| type vi secretion system baseplate subunit tsse | LG3211_RS11415 | Not Available | Positive | 2811788 - 2812219 | 16755.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
