Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter gummosus |
| Strain | strain 3.2.11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | amphibian skin |
| Biotic relationship | Not Available |
| Host(s) | Plethodon cinereus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015846 bp
Thymine Count
1011071 bp
Guanine Count
2010809 bp
Cytosine Count
2018892 bp
Genome Length
6056618 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LG3211_RS10935 | Not Available | Positive | 2647948 - 2648130 | 6879.89 |
| bon domain-containing protein | LG3211_RS10940 | Not Available | Positive | 2648232 - 2648600 | 12332.5 |
| giy-yig nuclease family protein | LG3211_RS10945 | Not Available | Positive | 2648815 - 2649429 | 23390.1 |
| hypothetical protein | LG3211_RS10950 | Not Available | Positive | 2649501 - 2649692 | 6865.31 |
| alpha-ketoglutarate-dependent dioxygenase alkb | LG3211_RS10955 | Not Available | Negative | 2649820 - 2650407 | 22535.9 |
| mfs transporter | LG3211_RS10960 | Not Available | Negative | 2650539 - 2651690 | 40940.3 |
| helix-turn-helix domain-containing protein | LG3211_RS10965 | Not Available | Positive | 2651928 - 2652755 | 30352.8 |
| alpha/beta hydrolase | LG3211_RS10970 | Not Available | Negative | 2653753 - 2654445 | 24387.9 |
| isoamylase | LG3211_RS10975 | Not Available | Negative | 2654950 - 2657259 | 83412.6 |
| hypothetical protein | LG3211_RS10980 | Not Available | Negative | 2657654 - 2658190 | 19221.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
