Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter gummosus |
| Strain | strain 3.2.11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | amphibian skin |
| Biotic relationship | Not Available |
| Host(s) | Plethodon cinereus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015846 bp
Thymine Count
1011071 bp
Guanine Count
2010809 bp
Cytosine Count
2018892 bp
Genome Length
6056618 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydei family protein | LG3211_RS08910 | Not Available | Positive | 2153881 - 2154435 | 20908.2 |
| type ii 3-dehydroquinate dehydratase | LG3211_RS08915 | Not Available | Positive | 2154630 - 2155094 | 16167.4 |
| hypothetical protein | LG3211_RS08920 | Not Available | Positive | 2155109 - 2155318 | 7901.25 |
| acireductone synthase | LG3211_RS08925 | Not Available | Negative | 2155434 - 2156129 | 25544.0 |
| acireductone dioxygenase | LG3211_RS08930 | Not Available | Negative | 2156264 - 2156821 | 20858.4 |
| methylthioribulose 1-phosphate dehydratase | LG3211_RS08935 | Not Available | Negative | 2156818 - 2157456 | 23794.2 |
| amino acid permease | LG3211_RS08940 | Not Available | Negative | 2157571 - 2159007 | 51285.3 |
| amino acid permease | LG3211_RS08945 | Not Available | Negative | 2159257 - 2160753 | 53009.5 |
| nudix hydrolase | LG3211_RS08950 | Not Available | Positive | 2160939 - 2161580 | 23812.7 |
| triacylglycerol lipase | LG3211_RS08955 | Not Available | Positive | 2162017 - 2163324 | 47214.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
