Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter gummosus |
| Strain | strain 3.2.11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | amphibian skin |
| Biotic relationship | Not Available |
| Host(s) | Plethodon cinereus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015846 bp
Thymine Count
1011071 bp
Guanine Count
2010809 bp
Cytosine Count
2018892 bp
Genome Length
6056618 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycolate phosphatase | LG3211_RS08505 | Not Available | Positive | 2059325 - 2060023 | 24664.6 |
| hypothetical protein | LG3211_RS08510 | Not Available | Positive | 2060005 - 2060790 | 28426.9 |
| gtp cyclohydrolase fole2 | LG3211_RS08515 | Not Available | Positive | 2060879 - 2061814 | 33477.8 |
| ggdef domain-containing protein | LG3211_RS08520 | Not Available | Positive | 2062182 - 2063954 | 66103.3 |
| hypothetical protein | LG3211_RS08525 | Not Available | Positive | 2063951 - 2064814 | 30483.5 |
| m23 family metallopeptidase | LG3211_RS08530 | Not Available | Negative | 2064828 - 2065703 | 30402.5 |
| dihydroorotase | LG3211_RS08535 | Not Available | Negative | 2065700 - 2067031 | 48435.6 |
| membrane protein insertion efficiency factor yidd | LG3211_RS24800 | Not Available | Negative | 2067016 - 2067324 | 11133.3 |
| rna polymerase-binding protein dksa | LG3211_RS24805 | Not Available | Positive | 2067681 - 2068778 | 38623.4 |
| mfs transporter | LG3211_RS08550 | Not Available | Negative | 2069048 - 2070283 | 43307.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
