Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter gummosus |
| Strain | strain 3.2.11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | amphibian skin |
| Biotic relationship | Not Available |
| Host(s) | Plethodon cinereus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015846 bp
Thymine Count
1011071 bp
Guanine Count
2010809 bp
Cytosine Count
2018892 bp
Genome Length
6056618 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | LG3211_RS08395 | Not Available | Negative | 2034457 - 2035598 | 43802.6 |
| hypothetical protein | LG3211_RS08405 | Not Available | Positive | 2035672 - 2035992 | 11295.7 |
| hypothetical protein | LG3211_RS08410 | Not Available | Positive | 2035992 - 2036525 | 19371.4 |
| spoiid/lytb domain-containing protein | LG3211_RS24795 | Not Available | Positive | 2037129 - 2038970 | 64227.4 |
| peptidoglycan recognition family protein | LG3211_RS08420 | Not Available | Positive | 2039078 - 2040661 | 56620.3 |
| dihydroxyacetone kinase subunit dhak | LG3211_RS08425 | Not Available | Positive | 2040881 - 2042500 | 55219.3 |
| Trna-ala | Not Available | Not Available | Positive | 2042801 - 2042876 | Not Available |
| ribonuclease d | LG3211_RS08435 | Not Available | Negative | 2042980 - 2044083 | 40561.4 |
| formylglycine-generating enzyme family protein | LG3211_RS08440 | Not Available | Positive | 2044400 - 2046232 | 65664.1 |
| m48 family metallopeptidase | LG3211_RS08445 | Not Available | Positive | 2046380 - 2047303 | 33284.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
