Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter gummosus |
| Strain | strain 3.2.11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | amphibian skin |
| Biotic relationship | Not Available |
| Host(s) | Plethodon cinereus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015846 bp
Thymine Count
1011071 bp
Guanine Count
2010809 bp
Cytosine Count
2018892 bp
Genome Length
6056618 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | LG3211_RS08300 | Not Available | Positive | 2001358 - 2002308 | 35025.0 |
| tonb-dependent receptor | LG3211_RS08305 | Not Available | Positive | 2002655 - 2005621 | 108846.0 |
| cellulase | LG3211_RS08310 | Not Available | Positive | 2005806 - 2008010 | 80178.3 |
| glycoside hydrolase family 2 protein | LG3211_RS08315 | Not Available | Positive | 2008069 - 2009874 | 67695.1 |
| sialate o-acetylesterase | LG3211_RS08320 | Not Available | Positive | 2009871 - 2011805 | 69787.0 |
| methyltransferase | LG3211_RS08325 | Not Available | Positive | 2011990 - 2013528 | 57181.9 |
| tim-barrel domain-containing protein | LG3211_RS08330 | Not Available | Positive | 2013546 - 2016419 | 108633.0 |
| glycosyl hydrolase family 95 catalytic domain-containing protein | LG3211_RS08335 | Not Available | Positive | 2016421 - 2018784 | 87791.7 |
| xylulokinase | LG3211_RS08340 | Not Available | Positive | 2018781 - 2020274 | 52953.2 |
| xylose isomerase | LG3211_RS08345 | Not Available | Positive | 2020310 - 2021644 | 49729.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
