Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter gummosus |
| Strain | strain 3.2.11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | amphibian skin |
| Biotic relationship | Not Available |
| Host(s) | Plethodon cinereus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015846 bp
Thymine Count
1011071 bp
Guanine Count
2010809 bp
Cytosine Count
2018892 bp
Genome Length
6056618 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease v subunit beta | LG3211_RS00430 | Not Available | Positive | 88672 - 92235 | 129552.0 |
| exodeoxyribonuclease v subunit alpha | LG3211_RS00435 | Not Available | Positive | 92232 - 94067 | 65566.5 |
| methyltransferase | LG3211_RS00440 | Not Available | Negative | 94573 - 95478 | 33954.9 |
| duf2798 domain-containing protein | LG3211_RS00445 | Not Available | Positive | 96046 - 96273 | 7936.95 |
| sdr family oxidoreductase | LG3211_RS00450 | Not Available | Positive | 96270 - 97244 | 34330.1 |
| efflux rnd transporter periplasmic adaptor subunit | LG3211_RS00455 | Not Available | Positive | 97241 - 98461 | 43459.6 |
| efflux rnd transporter permease subunit | LG3211_RS00460 | Not Available | Positive | 98697 - 101867 | 113583.0 |
| efflux transporter outer membrane subunit | LG3211_RS00465 | Not Available | Positive | 101860 - 103311 | 52418.5 |
| clostripain-related cysteine peptidase | LG3211_RS00470 | Not Available | Negative | 103836 - 105107 | 45378.3 |
| ketosteroid isomerase-related protein | LG3211_RS00475 | Not Available | Negative | 105476 - 105904 | 15928.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
