Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter gummosus |
| Strain | strain 3.2.11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | amphibian skin |
| Biotic relationship | Not Available |
| Host(s) | Plethodon cinereus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015846 bp
Thymine Count
1011071 bp
Guanine Count
2010809 bp
Cytosine Count
2018892 bp
Genome Length
6056618 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor domain-containing diguanylate cyclase | LG3211_RS07120 | Not Available | Negative | 1728308 - 1729321 | 37057.5 |
| ycii family protein | LG3211_RS07125 | Not Available | Negative | 1729439 - 1729810 | 13224.6 |
| type ii toxin-antitoxin system pemk/mazf family toxin | LG3211_RS07130 | Not Available | Positive | 1729833 - 1730369 | 19046.8 |
| hypothetical protein | LG3211_RS07135 | Not Available | Positive | 1730454 - 1731161 | 25871.4 |
| low specificity l-threonine aldolase | LG3211_RS07140 | Not Available | Positive | 1731280 - 1732431 | 41418.1 |
| aminomethyl-transferring glycine dehydrogenase | LG3211_RS07145 | Not Available | Negative | 1732519 - 1735380 | 103003.0 |
| voc family protein | LG3211_RS07150 | Not Available | Positive | 1736110 - 1736565 | 16349.5 |
| multidrug effflux mfs transporter | LG3211_RS07155 | Not Available | Positive | 1736565 - 1737827 | 44903.8 |
| phosphocholine-specific phospholipase c | LG3211_RS07160 | Not Available | Negative | 1738070 - 1740172 | 77846.4 |
| amino acid permease | LG3211_RS07165 | Not Available | Negative | 1740284 - 1741627 | 46050.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
