Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter gummosus |
| Strain | strain 3.2.11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | amphibian skin |
| Biotic relationship | Not Available |
| Host(s) | Plethodon cinereus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015846 bp
Thymine Count
1011071 bp
Guanine Count
2010809 bp
Cytosine Count
2018892 bp
Genome Length
6056618 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate kinase | LG3211_RS05330 | Not Available | Negative | 1323865 - 1324428 | 20177.3 |
| dodecin family protein | LG3211_RS05335 | Not Available | Positive | 1324583 - 1324786 | 7292.78 |
| hypothetical protein | LG3211_RS25460 | Not Available | Negative | 1324971 - 1325417 | 16055.2 |
| kinase | LG3211_RS05340 | Not Available | Negative | 1325511 - 1326401 | 33126.5 |
| pyridoxamine 5'-phosphate oxidase | LG3211_RS05345 | Not Available | Positive | 1326419 - 1327024 | 22704.7 |
| aminoglycoside 6'-n-acetyltransferase | LG3211_RS05350 | Not Available | Positive | 1327021 - 1327479 | 16921.6 |
| gnat family n-acetyltransferase | LG3211_RS05355 | Not Available | Negative | 1327499 - 1327918 | 15280.4 |
| methyltransferase | LG3211_RS05360 | Not Available | Negative | 1328108 - 1328448 | 12427.1 |
| cobalamin-binding protein | LG3211_RS05365 | Not Available | Positive | 1328620 - 1329414 | 29195.1 |
| helix-turn-helix domain-containing protein | LG3211_RS05370 | Not Available | Negative | 1329481 - 1329705 | 8332.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
