Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter gummosus |
| Strain | strain 3.2.11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | amphibian skin |
| Biotic relationship | Not Available |
| Host(s) | Plethodon cinereus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015846 bp
Thymine Count
1011071 bp
Guanine Count
2010809 bp
Cytosine Count
2018892 bp
Genome Length
6056618 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LG3211_RS04940 | Not Available | Negative | 1222963 - 1223976 | 35351.4 |
| rna polymerase sigma factor | LG3211_RS04945 | Not Available | Negative | 1223969 - 1224592 | 23116.5 |
| spfh domain-containing protein | LG3211_RS04950 | Not Available | Positive | 1224682 - 1225638 | 34675.1 |
| nfed family protein | LG3211_RS04955 | Not Available | Positive | 1225642 - 1226082 | 15804.4 |
| hypothetical protein | LG3211_RS04960 | Not Available | Positive | 1226086 - 1226703 | 21826.1 |
| glycine cleavage system aminomethyltransferase gcvt | LG3211_RS04965 | Not Available | Positive | 1226997 - 1228118 | 40502.7 |
| 2-hydroxychromene-2-carboxylate isomerase | LG3211_RS04970 | Not Available | Positive | 1228133 - 1228759 | 22860.3 |
| glycine cleavage system protein gcvh | LG3211_RS04975 | Not Available | Positive | 1228940 - 1229335 | 14075.1 |
| hypothetical protein | LG3211_RS25440 | Not Available | Positive | 1230017 - 1230712 | 26260.7 |
| hypothetical protein | LG3211_RS25445 | Not Available | Negative | 1230750 - 1231190 | 15963.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
