Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter gummosus |
| Strain | strain 3.2.11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | amphibian skin |
| Biotic relationship | Not Available |
| Host(s) | Plethodon cinereus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015846 bp
Thymine Count
1011071 bp
Guanine Count
2010809 bp
Cytosine Count
2018892 bp
Genome Length
6056618 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat-associated core domain-containing protein | LG3211_RS04805 | Not Available | Positive | 1182675 - 1187177 | 164698.0 |
| hypothetical protein | LG3211_RS25420 | Not Available | Positive | 1187187 - 1187522 | 12353.8 |
| hypothetical protein | LG3211_RS25425 | Not Available | Positive | 1187960 - 1188274 | 12040.5 |
| hypothetical protein | LG3211_RS25430 | Not Available | Positive | 1188598 - 1188828 | 8452.17 |
| adenosylhomocysteinase | LG3211_RS04810 | Not Available | Negative | 1189080 - 1190525 | 52468.4 |
| s9 family peptidase | LG3211_RS04815 | Not Available | Positive | 1191167 - 1193581 | 89124.4 |
| duf3955 domain-containing protein | LG3211_RS26735 | Not Available | Negative | 1193649 - 1194023 | 13470.6 |
| lysm domain-containing protein | LG3211_RS04825 | Not Available | Positive | 1194331 - 1196013 | 59432.8 |
| xvipcd domain-containing protein | LG3211_RS04830 | Not Available | Positive | 1196173 - 1197141 | 33961.1 |
| methionine adenosyltransferase | LG3211_RS04835 | Not Available | Negative | 1197248 - 1198471 | 44161.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
