Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam family heme chaperone hemw | LC55x_RS04475 | Not Available | Negative | 1128095 - 1129258 | 42768.5 |
| hypothetical protein | LC55x_RS04480 | Not Available | Negative | 1129311 - 1129901 | 21127.9 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | LC55x_RS04485 | Not Available | Negative | 1129898 - 1130491 | 21401.5 |
| voc family protein | LC55x_RS04490 | Not Available | Negative | 1130488 - 1130880 | 14469.0 |
| ribonuclease ph | LC55x_RS04495 | Not Available | Negative | 1131677 - 1132441 | 27076.3 |
| yicc/yloc family endoribonuclease | LC55x_RS04500 | Not Available | Positive | 1132509 - 1133369 | 31763.2 |
| guanylate kinase | LC55x_RS04505 | Not Available | Positive | 1133490 - 1134104 | 22818.0 |
| dna-directed rna polymerase subunit omega | LC55x_RS04510 | Not Available | Positive | 1134514 - 1134813 | 11109.0 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | LC55x_RS04515 | Not Available | Positive | 1135340 - 1137520 | 81224.8 |
| rida family protein | LC55x_RS04520 | Not Available | Positive | 1137654 - 1138037 | 13425.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
