Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | Positive | 1100672 - 1103537 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 1103709 - 1103823 | Not Available |
| hypothetical protein | LC55x_RS04390 | Not Available | Positive | 1104535 - 1106754 | 80752.7 |
| abc transporter atp-binding protein | LC55x_RS04395 | Not Available | Positive | 1107230 - 1109062 | 68112.0 |
| hypothetical protein | LC55x_RS04400 | Not Available | Negative | 1109235 - 1110722 | 55022.5 |
| ribose-5-phosphate isomerase rpia | LC55x_RS04405 | Not Available | Negative | 1110867 - 1111529 | 23201.3 |
| eve domain-containing protein | LC55x_RS04410 | Not Available | Negative | 1111649 - 1112119 | 17938.3 |
| 5-formyltetrahydrofolate cyclo-ligase | LC55x_RS04415 | Not Available | Negative | 1112148 - 1112741 | 21921.3 |
| Ncrna_class:other | Not Available | Not Available | Positive | 1112984 - 1113169 | Not Available |
| cell division protein zapa | LC55x_RS04420 | Not Available | Negative | 1113622 - 1113921 | 11143.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
