Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase family protein | LC55x_RS04330 | Not Available | Positive | 1091138 - 1092358 | 43153.9 |
| hit family protein | LC55x_RS04335 | Not Available | Positive | 1092385 - 1092810 | 15532.9 |
| tonb-dependent siderophore receptor | LC55x_RS04340 | Not Available | Positive | 1093022 - 1095130 | 77555.3 |
| glutamate-1-semialdehyde 2,1-aminomutase | LC55x_RS04345 | Not Available | Negative | 1095213 - 1096496 | 45188.1 |
| thiamine phosphate synthase | LC55x_RS04350 | Not Available | Negative | 1096489 - 1097142 | 23282.6 |
| rubredoxin | LC55x_RS04355 | Not Available | Positive | 1097207 - 1097398 | 6997.26 |
| duf192 domain-containing protein | LC55x_RS04360 | Not Available | Negative | 1097475 - 1097918 | 16180.4 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 1098590 - 1100134 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 1100240 - 1100315 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 1100335 - 1100411 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
