Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase/bleomycin resistance/extradiol dioxygenase family protein | LC55x_RS04280 | Not Available | Negative | 1078271 - 1078711 | 16417.3 |
| helix-turn-helix domain-containing protein | LC55x_RS04285 | Not Available | Negative | 1078838 - 1079662 | 29476.3 |
| 6-phosphofructokinase | LC55x_RS04290 | Not Available | Negative | 1079672 - 1080952 | 44924.8 |
| adenylate kinase | LC55x_RS04295 | Not Available | Positive | 1081156 - 1081734 | 20700.0 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | LC55x_RS04300 | Not Available | Positive | 1082008 - 1083384 | 49049.6 |
| lon peptidase substrate-binding domain-containing protein | LC55x_RS04305 | Not Available | Positive | 1083612 - 1084202 | 21538.8 |
| bifunctional deda family/phosphatase pap2 family protein | LC55x_RS04310 | Not Available | Negative | 1084583 - 1086598 | 73543.1 |
| serine/threonine protein kinase | LC55x_RS04315 | Not Available | Positive | 1086776 - 1087435 | 25865.4 |
| nad(p)-dependent oxidoreductase | LC55x_RS04320 | Not Available | Positive | 1087528 - 1088346 | 28801.9 |
| m20/m25/m40 family metallo-hydrolase | LC55x_RS04325 | Not Available | Negative | 1089311 - 1090900 | 56814.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
