Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| discoidin domain-containing protein | LC55x_RS04235 | Not Available | Positive | 1066320 - 1066826 | 18321.9 |
| m91 family zinc metallopeptidase | LC55x_RS04240 | Not Available | Positive | 1066961 - 1068496 | 52880.7 |
| m91 family zinc metallopeptidase | LC55x_RS04245 | Not Available | Positive | 1068667 - 1070490 | 61740.2 |
| hypothetical protein | LC55x_RS04250 | Not Available | Positive | 1070652 - 1071239 | 20844.7 |
| hypothetical protein | LC55x_RS04255 | Not Available | Positive | 1071452 - 1072081 | 22349.6 |
| s9 family peptidase | LC55x_RS04260 | Not Available | Negative | 1072186 - 1073142 | 33674.9 |
| ompa family protein | LC55x_RS28195 | Not Available | Negative | 1073497 - 1073937 | 15025.4 |
| methyltransferase | LC55x_RS04265 | Not Available | Negative | 1073995 - 1076019 | 69024.5 |
| hypothetical protein | LC55x_RS04270 | Not Available | Positive | 1076541 - 1077068 | 18382.4 |
| hypothetical protein | LC55x_RS04275 | Not Available | Negative | 1077183 - 1077986 | 28524.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
