Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | LC55x_RS04085 | Not Available | Positive | 1019813 - 1020922 | 38049.2 |
| efflux rnd transporter permease subunit | LC55x_RS04090 | Not Available | Positive | 1021043 - 1024204 | 116591.0 |
| glycerol kinase glpk | LC55x_RS04095 | Not Available | Negative | 1024349 - 1025854 | 55249.6 |
| mip/aquaporin family protein | LC55x_RS04100 | Not Available | Negative | 1025964 - 1026683 | 23876.7 |
| glycerol-3-phosphate dehydrogenase | LC55x_RS04105 | Not Available | Negative | 1027205 - 1028704 | 55977.9 |
| 3-isopropylmalate dehydrogenase | LC55x_RS04110 | Not Available | Negative | 1029075 - 1030163 | 38080.0 |
| 3-isopropylmalate dehydratase small subunit | LC55x_RS04115 | Not Available | Negative | 1030153 - 1030797 | 23733.1 |
| 3-isopropylmalate dehydratase large subunit | LC55x_RS04120 | Not Available | Negative | 1030797 - 1032233 | 51007.5 |
| 2-isopropylmalate synthase | LC55x_RS04125 | Not Available | Negative | 1032415 - 1034004 | 56423.8 |
| threonine dehydratase | LC55x_RS04130 | Not Available | Negative | 1034001 - 1035149 | 40646.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
