Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycei family protein | LC55x_RS04035 | Not Available | Positive | 1009077 - 1009655 | 20353.4 |
| pirin family protein | LC55x_RS04040 | Not Available | Positive | 1009690 - 1010400 | 25651.0 |
| zinc-finger domain-containing protein | LC55x_RS04045 | Not Available | Positive | 1010747 - 1010950 | 7419.8 |
| glycosyltransferase | LC55x_RS04050 | Not Available | Positive | 1010961 - 1012103 | 40760.3 |
| o-antigen ligase | LC55x_RS04055 | Not Available | Positive | 1012147 - 1013487 | 47583.5 |
| lpxl/lpxp family kdo(2)-lipid iv(a) lauroyl/palmitoleoyl acyltransferase | LC55x_RS04060 | Not Available | Negative | 1013678 - 1014604 | 34968.9 |
| lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferase | LC55x_RS04065 | Not Available | Positive | 1014779 - 1016077 | 48079.1 |
| tolc family outer membrane protein | LC55x_RS04070 | Not Available | Negative | 1016470 - 1017888 | 50653.2 |
| protein-l-isoaspartate o-methyltransferase | LC55x_RS04075 | Not Available | Negative | 1017977 - 1018645 | 24381.2 |
| tetr/acrr family transcriptional regulator | LC55x_RS04080 | Not Available | Negative | 1018831 - 1019550 | 25707.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
