Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | LC55x_RS26655 | Not Available | Negative | 982685 - 983629 | 34674.8 |
| nad(p)-dependent alcohol dehydrogenase | LC55x_RS03940 | Not Available | Positive | 983745 - 984755 | 35494.7 |
| endonuclease | LC55x_RS03945 | Not Available | Negative | 985554 - 987344 | 61489.4 |
| helix-turn-helix domain-containing protein | LC55x_RS03950 | Not Available | Negative | 987723 - 988127 | 14180.2 |
| cupin domain-containing protein | LC55x_RS03955 | Not Available | Negative | 988534 - 988908 | 13794.5 |
| hypothetical protein | LC55x_RS03960 | Not Available | Negative | 989022 - 989276 | 9322.07 |
| helix-turn-helix domain-containing protein | LC55x_RS03965 | Not Available | Positive | 989376 - 990179 | 28833.5 |
| co-chaperone groes | LC55x_RS03970 | Not Available | Positive | 990497 - 990784 | 10107.2 |
| chaperonin groel | LC55x_RS03975 | Not Available | Positive | 990911 - 992551 | 57395.3 |
| hypothetical protein | LC55x_RS03980 | Not Available | Negative | 992779 - 994236 | 53166.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
