Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase biotin carboxyl carrier protein | LC55x_RS03895 | Not Available | Negative | 971283 - 971768 | 17105.7 |
| type ii 3-dehydroquinate dehydratase | LC55x_RS03900 | Not Available | Negative | 971852 - 972292 | 15823.9 |
| hypothetical protein | LC55x_RS03905 | Not Available | Positive | 972729 - 973217 | 18551.5 |
| tlpa disulfide reductase family protein | LC55x_RS03910 | Not Available | Negative | 973420 - 974016 | 20880.6 |
| protein-disulfide reductase dsbd | LC55x_RS03915 | Not Available | Negative | 974028 - 976583 | 87631.9 |
| divalent-cation tolerance protein cuta | LC55x_RS03920 | Not Available | Negative | 976580 - 976921 | 12697.2 |
| hypothetical protein | LC55x_RS28060 | Not Available | Negative | 977184 - 977321 | 5333.4 |
| hypothetical protein | LC55x_RS28485 | Not Available | Negative | 977321 - 977446 | 4284.19 |
| virulence factor family protein | LC55x_RS03925 | Not Available | Positive | 978145 - 979566 | 49828.5 |
| methyltransferase | LC55x_RS03930 | Not Available | Negative | 979629 - 982214 | 93396.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
