Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4126 domain-containing protein | LC55x_RS03695 | Not Available | Negative | 929258 - 929848 | 20358.1 |
| duf6776 family protein | LC55x_RS03700 | Not Available | Positive | 929919 - 930653 | 27167.2 |
| polymer-forming cytoskeletal protein | LC55x_RS03705 | Not Available | Positive | 930689 - 931084 | 13763.6 |
| duf6776 family protein | LC55x_RS03710 | Not Available | Positive | 931116 - 931886 | 27343.0 |
| iron-sulfur cluster insertion protein erpa | LC55x_RS03715 | Not Available | Positive | 931944 - 932318 | 13282.4 |
| nad(+) diphosphatase | LC55x_RS03720 | Not Available | Positive | 932315 - 933283 | 34704.6 |
| regulatory signaling modulator protein ampe | LC55x_RS03725 | Not Available | Positive | 933673 - 934599 | 33093.3 |
| rna polymerase sigma factor | LC55x_RS25955 | Not Available | Positive | 935010 - 935723 | 26450.7 |
| fecr family protein | LC55x_RS03735 | Not Available | Positive | 935720 - 936727 | 36463.8 |
| tonb-dependent receptor | LC55x_RS03740 | Not Available | Positive | 936822 - 939674 | 104427.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
