Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent vitamin b12 receptor | LC55x_RS03645 | Not Available | Negative | 920631 - 922529 | 69046.0 |
| tfox/sxy family protein | LC55x_RS03650 | Not Available | Negative | 923419 - 923853 | 15659.1 |
| gaf domain-containing protein | LC55x_RS03655 | Not Available | Negative | 923850 - 924332 | 17077.2 |
| dethiobiotin synthase | LC55x_RS03660 | Not Available | Positive | 924500 - 925204 | 24536.6 |
| phasin family protein | LC55x_RS03665 | Not Available | Negative | 925521 - 925925 | 14352.8 |
| 6-carboxytetrahydropterin synthase qued | LC55x_RS03670 | Not Available | Negative | 926438 - 926800 | 13813.5 |
| Trna-met | Not Available | Not Available | Positive | 926926 - 927002 | Not Available |
| methyltransferase | LC55x_RS03680 | Not Available | Positive | 927128 - 927607 | 18900.7 |
| bacterioferritin-associated ferredoxin | LC55x_RS03685 | Not Available | Positive | 927869 - 928072 | 7139.6 |
| bacterioferritin | LC55x_RS03690 | Not Available | Positive | 928355 - 928825 | 18160.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
