Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LC55x_RS03545 | Not Available | Negative | 889991 - 890233 | 8992.44 |
| efflux rnd transporter periplasmic adaptor subunit | LC55x_RS03550 | Not Available | Negative | 890236 - 891519 | 45613.1 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | LC55x_RS03555 | Not Available | Positive | 891707 - 893539 | 66003.2 |
| radical sam protein | LC55x_RS03560 | Not Available | Positive | 894059 - 895234 | 43829.3 |
| akg-hexxh-type peptide beta-hydroxylase | LC55x_RS03565 | Not Available | Positive | 895248 - 896417 | 41870.3 |
| peptidase domain-containing abc transporter | LC55x_RS03570 | Not Available | Positive | 896580 - 898712 | 78003.2 |
| sdr family oxidoreductase | LC55x_RS03575 | Not Available | Negative | 898949 - 899815 | 30387.0 |
| o-methyltransferase | LC55x_RS03580 | Not Available | Negative | 899840 - 900496 | 23858.6 |
| tetr family transcriptional regulator | LC55x_RS03585 | Not Available | Positive | 900627 - 901259 | 23080.7 |
| c1 family peptidase | LC55x_RS03590 | Not Available | Positive | 901655 - 902815 | 41235.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
