Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | LC55x_RS03495 | Not Available | Positive | 877266 - 878639 | 48322.7 |
| hypothetical protein | LC55x_RS03500 | Not Available | Negative | 878785 - 879654 | 30485.0 |
| glucose 1-dehydrogenase | LC55x_RS03505 | Not Available | Negative | 880016 - 880765 | 25147.8 |
| transcriptional regulator | LC55x_RS03510 | Not Available | Positive | 880868 - 881251 | 13690.7 |
| pas domain-containing sensor histidine kinase | LC55x_RS03515 | Not Available | Negative | 881414 - 882676 | 46808.6 |
| sigma-54 dependent transcriptional regulator | LC55x_RS03520 | Not Available | Negative | 882729 - 884087 | 49141.0 |
| duf885 family protein | LC55x_RS03525 | Not Available | Negative | 884290 - 886176 | 70839.4 |
| abc transporter permease | LC55x_RS03530 | Not Available | Negative | 886385 - 887614 | 44762.8 |
| abc transporter permease | LC55x_RS03535 | Not Available | Negative | 887623 - 888954 | 48988.9 |
| abc transporter atp-binding protein | LC55x_RS03540 | Not Available | Negative | 888965 - 889735 | 27899.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
