Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase | LC55x_RS03350 | Not Available | Positive | 848956 - 849657 | 25633.1 |
| had family phosphatase | LC55x_RS03355 | Not Available | Positive | 849623 - 850393 | 26918.6 |
| duf1415 domain-containing protein | LC55x_RS03360 | Not Available | Negative | 850601 - 851185 | 21338.2 |
| yajq family cyclic di-gmp-binding protein | LC55x_RS03365 | Not Available | Negative | 851223 - 851705 | 18023.4 |
| nad(p)-dependent alcohol dehydrogenase | LC55x_RS03370 | Not Available | Positive | 851867 - 852922 | 37476.8 |
| hypothetical protein | LC55x_RS03375 | Not Available | Positive | 853451 - 853987 | 19738.0 |
| dmt family transporter | LC55x_RS03380 | Not Available | Positive | 854126 - 855010 | 31706.9 |
| voc family protein | LC55x_RS03385 | Not Available | Positive | 855225 - 856010 | 28051.6 |
| ompw family protein | LC55x_RS03390 | Not Available | Negative | 856096 - 856725 | 21791.8 |
| hypothetical protein | LC55x_RS26650 | Not Available | Positive | 857092 - 857313 | 7916.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
