Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator | LC55x_RS03245 | Not Available | Positive | 830111 - 830545 | 15694.2 |
| polysaccharide deacetylase family protein | LC55x_RS03250 | Not Available | Negative | 830583 - 831641 | 39095.6 |
| duf6249 domain-containing protein | LC55x_RS03255 | Not Available | Negative | 831743 - 832066 | 11613.6 |
| rna polymerase sigma factor | LC55x_RS03260 | Not Available | Positive | 832309 - 832875 | 21331.6 |
| hypothetical protein | LC55x_RS03265 | Not Available | Positive | 832872 - 833369 | 18092.5 |
| rna polymerase sigma factor | LC55x_RS03270 | Not Available | Positive | 833833 - 834390 | 21662.1 |
| rebb family r body protein | LC55x_RS03275 | Not Available | Positive | 834582 - 834815 | 7960.5 |
| hypothetical protein | LC55x_RS26640 | Not Available | Positive | 835396 - 835839 | 14902.6 |
| hypothetical protein | LC55x_RS03285 | Not Available | Positive | 835942 - 838245 | 83077.1 |
| hypothetical protein | LC55x_RS03290 | Not Available | Positive | 838294 - 838578 | 9525.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
