Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | LC55x_RS03045 | Not Available | Positive | 770746 - 771768 | 36959.5 |
| abc transporter permease | LC55x_RS03050 | Not Available | Positive | 771765 - 772526 | 28069.3 |
| amino acid permease | LC55x_RS03055 | Not Available | Positive | 772818 - 774197 | 49523.7 |
| vwa domain-containing protein | LC55x_RS03060 | Not Available | Negative | 774388 - 775911 | 53735.4 |
| m48 family metallopeptidase | LC55x_RS03065 | Not Available | Positive | 776287 - 776772 | 17752.7 |
| duf3297 family protein | LC55x_RS03070 | Not Available | Negative | 776993 - 777253 | 9666.34 |
| simpl domain-containing protein | LC55x_RS03075 | Not Available | Positive | 777467 - 778177 | 25786.2 |
| lactonase family protein | LC55x_RS03080 | Not Available | Positive | 778460 - 779605 | 40441.3 |
| aldo/keto reductase | LC55x_RS03085 | Not Available | Positive | 780281 - 781309 | 37558.6 |
| hypothetical protein | LC55x_RS03090 | Not Available | Positive | 781539 - 782783 | 45911.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
