Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LC55x_RS02795 | Not Available | Positive | 705830 - 708142 | 82414.3 |
| duf3348 domain-containing protein | LC55x_RS02800 | Not Available | Positive | 708481 - 709233 | 27105.3 |
| duf802 domain-containing protein | LC55x_RS02805 | Not Available | Positive | 709235 - 711679 | 87014.6 |
| ompa family protein | LC55x_RS02810 | Not Available | Positive | 711676 - 712317 | 22975.5 |
| duf2894 domain-containing protein | LC55x_RS02815 | Not Available | Positive | 712324 - 712983 | 24178.4 |
| hypothetical protein | LC55x_RS02820 | Not Available | Positive | 713129 - 714391 | 45573.1 |
| lyttr family dna-binding domain-containing protein | LC55x_RS02825 | Not Available | Negative | 714402 - 715160 | 28171.5 |
| sensor histidine kinase | LC55x_RS02830 | Not Available | Negative | 715148 - 716203 | 39194.9 |
| chromate efflux transporter | LC55x_RS02835 | Not Available | Negative | 716337 - 717578 | 42226.2 |
| duf6229 family protein | LC55x_RS02840 | Not Available | Positive | 718186 - 718374 | 6350.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
