Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytanoyl-coa dioxygenase family protein | LC55x_RS02750 | Not Available | Positive | 695336 - 696028 | 24934.2 |
| voc family protein | LC55x_RS02755 | Not Available | Positive | 696198 - 696692 | 17812.2 |
| hypothetical protein | LC55x_RS02760 | Not Available | Positive | 696945 - 697619 | 24417.6 |
| fad-dependent monooxygenase | LC55x_RS02765 | Not Available | Negative | 697677 - 698831 | 41590.1 |
| nad(p)/fad-dependent oxidoreductase | LC55x_RS28190 | Not Available | Negative | 698865 - 699188 | 11530.0 |
| hypothetical protein | LC55x_RS02770 | Not Available | Negative | 699697 - 701373 | 61043.9 |
| voc family protein | LC55x_RS02775 | Not Available | Positive | 701781 - 702161 | 13128.4 |
| agmatine/peptidylarginine deiminase | LC55x_RS02780 | Not Available | Negative | 702204 - 703337 | 41320.9 |
| hamp domain-containing sensor histidine kinase | LC55x_RS02785 | Not Available | Negative | 703474 - 704706 | 44400.5 |
| response regulator transcription factor | LC55x_RS02790 | Not Available | Negative | 704690 - 705367 | 24376.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
