Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | LC55x_RS02655 | Not Available | Positive | 670818 - 672251 | 50790.4 |
| abc transporter substrate-binding protein | LC55x_RS02660 | Not Available | Positive | 672541 - 673557 | 36708.1 |
| nadp-dependent malic enzyme | LC55x_RS02665 | Not Available | Positive | 673806 - 676118 | 83712.2 |
| glycosyltransferase | LC55x_RS02670 | Not Available | Positive | 676130 - 677191 | 39166.5 |
| flavodoxin family protein | LC55x_RS02675 | Not Available | Negative | 677493 - 678125 | 23266.8 |
| lysr substrate-binding domain-containing protein | LC55x_RS02680 | Not Available | Positive | 678327 - 679217 | 32278.6 |
| lysr family transcriptional regulator | LC55x_RS02685 | Not Available | Negative | 679486 - 680364 | 31085.5 |
| glutathione transferase gsta | LC55x_RS02690 | Not Available | Positive | 680451 - 681095 | 24299.0 |
| multidrug efflux smr transporter | LC55x_RS02695 | Not Available | Positive | 681092 - 681421 | 11018.9 |
| rep-associated tyrosine transposase | LC55x_RS28540 | Not Available | Positive | 681648 - 682163 | 19399.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
