Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mmcq/yjbr family dna-binding protein | LC55x_RS02505 | Not Available | Positive | 639530 - 639994 | 17684.3 |
| plp-dependent aminotransferase family protein | LC55x_RS02510 | Not Available | Negative | 639918 - 641330 | 51196.6 |
| hypothetical protein | LC55x_RS02515 | Not Available | Positive | 641569 - 641940 | 13807.8 |
| twin transmembrane helix small protein | LC55x_RS02520 | Not Available | Positive | 641937 - 642143 | 7134.12 |
| hypothetical protein | LC55x_RS02525 | Not Available | Positive | 642226 - 642684 | 16445.1 |
| cupin domain-containing protein | LC55x_RS02530 | Not Available | Positive | 642681 - 643061 | 14031.6 |
| adp-ribosylglycohydrolase family protein | LC55x_RS02535 | Not Available | Positive | 643058 - 643987 | 32691.8 |
| hypothetical protein | LC55x_RS02540 | Not Available | Negative | 644131 - 644475 | 12486.7 |
| amidohydrolase family protein | LC55x_RS02545 | Not Available | Negative | 644757 - 648266 | 127378.0 |
| degv family protein | LC55x_RS02550 | Not Available | Negative | 648642 - 649598 | 34937.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
