Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | LC55x_RS02410 | Not Available | Negative | 609785 - 610540 | 27877.7 |
| phosphoenolpyruvate carboxylase | LC55x_RS02415 | Not Available | Positive | 610803 - 613565 | 100662.0 |
| hypothetical protein | LC55x_RS02420 | Not Available | Positive | 614405 - 616096 | 59792.4 |
| formaldehyde-responsive transcriptional repressor frmr | LC55x_RS02425 | Not Available | Positive | 616430 - 616705 | 9911.01 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | LC55x_RS02430 | Not Available | Positive | 616827 - 617936 | 38870.9 |
| s-formylglutathione hydrolase | LC55x_RS02435 | Not Available | Positive | 618113 - 618943 | 30257.8 |
| efflux rnd transporter periplasmic adaptor subunit | LC55x_RS02440 | Not Available | Negative | 619106 - 620251 | 40091.0 |
| efflux rnd transporter permease subunit | LC55x_RS02445 | Not Available | Negative | 620248 - 623442 | 113269.0 |
| hypothetical protein | LC55x_RS26605 | Not Available | Negative | 624008 - 624496 | 16245.1 |
| hypothetical protein | LC55x_RS02450 | Not Available | Positive | 624495 - 625094 | 21363.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
