Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LC55x_RS27560 | Not Available | Negative | 6332372 - 6332692 | 12229.3 |
| hypothetical protein | LC55x_RS25615 | Not Available | Negative | 6333039 - 6333593 | 20392.7 |
| nadp-dependent isocitrate dehydrogenase | LC55x_RS25620 | Not Available | Positive | 6333729 - 6335057 | 47742.2 |
| duf4344 domain-containing metallopeptidase | LC55x_RS25625 | Not Available | Negative | 6335312 - 6336346 | 38077.8 |
| hypothetical protein | LC55x_RS25630 | Not Available | Positive | 6336624 - 6336998 | 13381.7 |
| hypothetical protein | LC55x_RS25635 | Not Available | Positive | 6337029 - 6337475 | 16838.8 |
| hypothetical protein | LC55x_RS25640 | Not Available | Negative | 6338443 - 6338934 | 17562.4 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | LC55x_RS25645 | Not Available | Positive | 6339078 - 6340820 | 65868.4 |
| hypothetical protein | LC55x_RS25650 | Not Available | Negative | 6341044 - 6341319 | 9682.29 |
| methyltransferase | LC55x_RS25655 | Not Available | Positive | 6341534 - 6342412 | 32898.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
